Publications


Below is a list of publications using our services

Genetic diversity, population structure, and botanical variety of 320 global peanut accessions revealed through tunable genotyping-by-sequencing

Zheng Zheng, Ziqi Sun, Yuanjin Fang, Feiyan Qi, Hua Liu, Lijuan Miao, Pei Du, Lei Shi, Wei Gao, Suoyi Han, Wenzhao Dong, Fengshou Tang, Feng Cheng, Haiyan Hu, Bingyan Huang, Xinyou Zhang

Genetic characterization of inbred lines from Shaan A and B groups for identifying loci associated with maize grain yield

Ting Li, Jianzhou Qu, Yahui Wang, Liguo Chang, Kunhui He, Dongwei Guo, Xinghua Zhang, Shutu Xu, Jiquan Xue

Genomic analysis reveals multiple mismatches between biological and management units in yellowfin tuna (Thunnus albacares)

Rachel B. Mullins, Niall J. McKeown, Warwick H. H. Sauer, Paul W. Shaw

Integration of genetic and cytogenetic maps and identification of sex chromosome in garden asparagus (Asparagus officinalis L.)

Roberto Moreno, Patricia Castro, Jan Vrána, Marie Kubaláková, Petr Cápal, Verónica García, Juan Gil, Teresa Millán, Jaroslav Doležel

Genotype-Corrector: improved genotype calls for genetic mapping in F2 and RIL populations

Chenyong Miao, Jingping Fang, Delin Li, Pingping Liang, Xingtan Zhang, Jinliang Yang, James C. Schnable, Haibao Tang

Development of reduced gluten wheat enabled by determination of the genetic basis of the lys3a low hordein barley mutant

Charles Paul Moehs, William J Austill, Aaron Holm, Tao A.G. Large, Dayna Loeffler, Jessica Mullenberg, Patrick S Schnable, Wayne Skinner, Jos van Boxtel, Liying Wu, Cate McGuire

Exploiting the genomic diversity of rice (Oryza Sativa L.): snp-typing in 11 early-backcross introgression-breeding populations

Jauhar Ali1, Umair M. Aslam, Rida Tariq, Varunseelan Murugaiyan, Patrick S. Schnable, Delin Li, Corinne M. Marfori-Nazarea, Jose E. Hernandez, Muhammad Arif, Jianlong Xu, Zhikang Li

Phenotypic data from inbred parents can improve genomic prediction in pearl millet hybrids

Zhikai Liang, Shashi K. Gupta, Cheng-Ting Yeh, Yang Zhang, Daniel W. Ngu, Ramesh Kumar, Hemant T. Patil, Kanulal D. Mungra, Dev Vart Yadav, Abhishek Rathore, Rakesh K. Srivastava, Rajeev Gupta, Jinliang Yang, Rajeev K. Varshney, Patrick S. Schnable, James C. Schnable

Molecular markers reliably predict post-harvest deterioration of fresh-cut lettuce in modified atmosphere packaging

Ivan Simko, Ryan J. Hayes, Maria-Jose Truco, Richard W. Michelmore, Rudie Antonise, Mark Massoudi

Detection of genomic loci associated with chromosomal recombination using high-density linkage mapping in Setaria

Guanqing Jia, Haigang Wang, Sha Tang, Hui Zhi, Sichen Liu, Qifen Wen, Zhijun Qiao, Xianmin Diao

tGBS® genotyping-by-sequencing enables reliable genotyping of heterozygous loci

Alina Ott, Sanzhen Liu, James C. Schnable, Cheng-Ting "Eddy" Yeh, Kai-Sin Wang, Patrick S. Schnable

Simultaneous Improvement and Genetic Dissection of Salt Tolerance of Rice (Oryza sativa L.) by Designed QTL Pyramiding

Yunlong Pang, Kai Chen, Xiaoqian Wang, Wensheng Wang, Jianlong Xu, Jauhar Ali, Zhikang Li

Genetic Determinants of Crop Timing and Quality Traits in Two Interspecific Petunia Recombinant Inbred Line Populations

Yufang Guo, Wei-Kuang Lin, QiuXia Chen, Veronica A. Vallejo, Ryan M. Warner

Genotyping-by-sequencing reveals three QTL for clubroot resistance to six pathotypes of Plasmodiophora brassicae in Brassica rapa

Fengqun Yu, Xingguo Zhang, Gary Peng, Kevin C. Falk, Stephen E. Strelkov, Bruce D. Gossen

Genomewide single nucleotide polymorphism discovery in Atlantic salmon (Salmo salar): validation in wild and farmed American and European populations

J. M. Yáñez, S. Naswa, M. E. López, L. Bassini, K. Correa, J. Gilbey, L. Bernatchez, A. Norris, R. Neira, J. P. Lhorente, P. S. Schnable, S. Newman, A. Mileham, N. Deeb, A. Di Genova, A. Maass

ALLMAPS: robust scaffold ordering based on multiple maps

Haibao Tang, Xingtan Zhang, Chenyong Miao, Jisen Zhang, Ray Ming, James C Schnable, Patrick S Schnable, Eric Lyons, Jianguo Lu

Detection, validation, and application of genotyping-by-sequencing based single nucleotide polymorphisms in upland cotton

M. Sariful Islama, Gregory N. Thyssena, Johnie N. Jenkinsb, David D. Fang

Genome-wide analysis of regulation of gene expression and H3K9me2 distribution by JIL-1 kinase mediated histone H3S10 phosphorylation in Drosophila

Weili Cai, Chao Wang, Yeran Li, Changfu Yao, Lu Shen, Sanzhen Liu, Xiaomin Bao, Patrick S. Schnable, Jack Girton, Jørgen Johansen, Kristen M. Johansen

Histone lysine methyltransferase SDG8 is involved in brassinosteroid-regulated gene expression in Arabidopsis thaliana

Xiaolei Wang, Jiani Chen, Zhouli Xie, Sanzhen Liu, Trevor Nolan, Huaxun Ye, Mingcai Zhang, Hongqing Guo, Patrick S. Schnable, Zhaohu Li, Yanhai Yin

RD26 mediates crosstalk between drought and brassinosteroid signalling pathways

Huaxun Ye, Sanzhen Liu, Buyun Tang, Jiani Chen, Zhouli Xie, Trevor M. Nolan, Hao Jiang, Hongqing Guo, Hung-Ying Lin, Lei Li, Yanqun Wang, Hongning Tong, Mingcai Zhang, Chengcai Chu, Zhaohu Li, Maneesha Aluru, Srinivas Aluru, Patrick S. Schnable, Yanhai Yin